| Name | Version | Summary | date |
| modisco |
2.5.2 |
Transcription Factor MOtif Discovery from Importance SCOres |
2025-10-12 13:50:18 |
| bpnet-lite |
0.9.4 |
bpnet-lite is a minimal implementation of BPNet, a neural network aimed at interpreting regulatory activity of the genome. |
2025-08-28 17:36:03 |
| modisco-lite |
2.3.2 |
Transcription Factor MOtif Discovery from Importance SCOres - lite |
2025-02-24 23:09:41 |
| pomegranate |
1.1.2 |
A PyTorch implementation of probabilistic models. |
2025-02-07 18:05:58 |
| tangermeme |
0.4.3 |
Biological sequence analysis for the modern age. |
2024-12-17 18:05:03 |
| bam2bw |
0.1.0 |
A command-line tool for converting SAM/BAM files into stranded bp resolution BigWig files. |
2024-10-30 12:23:55 |
| protopunica |
0.14.8.post2 |
Protopunica is pomegranate frozen at version 0.14.8. |
2024-08-28 22:44:31 |
| dragonnfruit |
0.3.1 |
dragonnfruit is a method for analyzing scATAC-seq experiments. |
2023-10-10 22:20:43 |
| torchegranate |
0.5.0 |
A rewrite of pomegranate using PyTorch. |
2023-04-16 03:50:30 |
| apricot-select |
0.6.1 |
apricot is a package for submodular selection of representative sets for machine learning models. |
2021-02-18 06:55:02 |
Jacob Schreiber